Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
YSLFPNSPKWTSKVVTYRIVSYTRDLPHITVDRLVSKALNMWGKEIPLHFRKVVWGTADIMIGFARGAHGDSYPFDGPGNTLAHAFAPGTGLGGDAHFDEDERWTDGSSLGINFLYAATHELGHSLGMGHSSDPNAVMYPTYGNGDPQNFKLSQDDIKGIQKLYGKRSNSRKK
4H1Q Chain:A ((1-160))
---FEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAFPPGPGIQGDAHFDDDELWSLGKGQGYSLFLVAAHQFGHALGLDHSSVPEALMYPMYRFT--EGPPLHKDDVNGIRHLYG--------
General information:
TITO was launched using:
RESULT:
Template:
4H1Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64766 for 1203 contacts (-53.8/contact) +
2D Compatibility (PS) -17528 + (NN) -13159 + (LL) 280
1D Compatibility (HY) -14000 + (ID) 3600
Total energy: -112773.0 ( -93.74 by residue)
QMean score : 0.765
(partial model without unconserved sides chains):
PDB file :
Tito_4H1Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H1Q-query.scw
PDB file :
Tito_Scwrl_4H1Q.pdb
: