Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGAPGPLRLALLLLGMVGRAGPRPQGATVSLWETVQKWREYRRQCQRSLTEDPPPATDLFCNRTFDEYACWPDGEPGSFVNVSCPWYLPWASSVPQGHVYRFCTAEGLWLQKDNSSLPWRDLSECEESKRGERSSPEEQLLFLYIIYTVGYALSFSALVIASAILLGFRHLHCTRNYIHLNLFASFILRALSVFIKD-AALKWMYSTAAQQHQWDGLLSYQDSLSCRLVFLLMQYCVAANYYWLLVEGVYLYTLLAFSVLSE----QWIFRLYVSIGWGVPLLFVVPWGIV-KYLY---EDEGCWTRNSNM----------NYWLIIRLPILFAIGVNFLIFVRVICIVVSKLKA----------NLMCKTDIKCRLAKSTLTLIPLLGTHEVIFAFVMDEHAR---GTLRFIKLFTELSFTSFQGLMVAILYCFVNNEVQLEFRKSWERWRLEHLHIQRDSSMKPLKCPTSSLSSGATAGSSMYTATCQASCS |
| 2Z73 Chain:A ((35-333)) | ---------------------------------------------------------------------------------------------------------------------------------------------YSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKW------------IFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKETEDDKDAETEIPAGE------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Z73.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -252670 for 2118 contacts (-119.3/contact) +
2D Compatibility (PS) -27193 + (NN) -9144 + (LL) 9260
1D Compatibility (HY) -10400 + (ID) 1450
Total energy: -291597.0 ( -137.68 by residue)
QMean score : 0.326
|
|
|