Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPANFTEGSFDSSGTGQTLDSSPVACTETVTFTEVVEGKEWGSFYYSFKTEQLITLWVL-FVFTIVGNSVVLFSTWRRKKK-SRMTFFVTQLAITDSFTGLVNILTDINWRFTGDFTAPDLVCRVVRYLQVVLLYASTYVLVSLSIDRYHAIVYPMKFLQGEKQARVLIVIAWSLSFLFSI-PTLIIFGKRTLSNGEVQCWALWPDD--SYWTPYMTIVAFLVYFIPLTIISIMYGIVIRTIWIKSKTYETVIS----NCSDGK-----------------LCSSYNRGLI---SKAKIKAIKYSIIIILAFICCWSPYFLFDILDNFNLLP-------DTQERFYAS-VIIQNLPALNSAINPLIYCVFSSSISFPCREQRSQDSRMTFRERTERHEMQILSKPEFI |
| 4XNV Chain:A ((38-382)) | ----------------------SFKCALTKT---------------GFQFYYLPAVYILVFIIGFLGNSVAIWMFVFHMKPWSGISVYMFNLALADFLYVLTLPALIFYYFNKTDWIFGDAMCKLQRFIFHVNLYGSILFLTCISAHRYSGVVYPKSLGRLKKKNAICISVLVWLIVVVAISPILFYSGTGVRKNKTITCYDTTSDEYLRSYFIYSMCTTVAMFCVPLVLILGCYGLIVRALIYKMKKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIVCPLCGVGKDQFEEVEEPLRRKSIYLVIIVLTVFAVSYIPFHVMKTMNLRARLDFQTPAMCAFNDRVYATYQVTRGLASLNSCVNPILYFLAGD----------------TFRRR--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205181 for 2175 contacts (-94.3/contact) +
2D Compatibility (PS) -30862 + (NN) -2570 + (LL) 3552
1D Compatibility (HY) -28400 + (ID) 3900
Total energy: -267361.0 ( -122.92 by residue)
QMean score : 0.221
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