Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------MNNVIEFILLGLTHNPELQKFLFVMFLITYLITLAGNLFI---------SVIIFISPALGSP----------MYSFPSYLFIIDIFCSSSIAPKMNFDLISEKNTISFNGCMTQL---FT------EHFFYYYYYYTLTEIILLSVMAYDHYVAIRKPLH-----YATIMSQ--------------PMCGFLMVVAGILGFVHGGIQTLFIAQ------LPFCGPN------------------VINHFMCDLVPLLELACTDTHTLGPLIAANSGSLCFLIFSMLVASYVIILCFLRTHSSEGR-RKALSSCASHIFIVILFFVPFSYLYLRPTSFPTDKAVTVFCTLFTP------------------MLNPL--IYTLKNKEVKNVIKKLWKQIMTTDDK |
| 4L9P Chain:B ((68-519)) | VHPGIPALFREPPLIHDLLSTETTELQSETVNKCLPLLKGIHNSQKGPFNKYGIPALQRKDHLEYLYDSLEDYPASFVALDASRPWMVYWALAGLCLLGEDVTRFRERVISTFTAAQNSTGGIGGGHGQMSHVASSYAAVLSIAMVGG---EEAFKLIDRKAMWKWLGKLKQPDGGFTVCEGGEEDVRGAYCAMVVHALLDLPLALPPEAEARQNGLETFTDGLPEYLSRCQTYEGGISGSPGSEAHGAYAFCALACLCLLGRPEVVVPRYMNIATLLPWLSARQYAPEGGFSGRTNKLVDGCYSHWVGNCWPLVQAALDGTQ---PLAGPKRSSVGNLYSREGLTRYILSCCQCKLGGLRDKPGKHPDSYHTCYALTGLSTVQYYHYCTDSSVSSKDDFSSAFSWKHDPNFASDGQGSDIGVFTENDRLVPFHPIFVIPHKSAEDIRVWFENQSFDL--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L9P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -346181 for 2397 contacts (-144.4/contact) +
2D Compatibility (PS) -29401 + (NN) 2966 + (LL) 176
1D Compatibility (HY) -8800 + (ID) 2800
Total energy: -384040.0 ( -160.22 by residue)
QMean score : 0.238
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