Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSASNITLTHPTAFLLVGIPGLEHL------HIWISIPFCLAYTLALLGNCTLLLII-QADAALHEPMYLFLAMLA-AIDLVLSSSALPKMLAIFWFRDRE-INFFACLAQMFFLHSFSIMESAVLLAMAFDRYVAICKPLHYTKVLTGSLITKIGMAAVARAVTLMTPL-------------PFLLRCFHYC------------RGPVIAHCYCEHMAVVRLACGDTSFNNIYGIAVAMFIVVLDLLLVILSYIFI---------------------LQAVLLLASQEARYKAFGTCVSHIGAILAFYTTVVISSVMHRVARHAAPHVH----ILLANFYLLFPPMVNPIIYGVKTKQI-RESILGVFPRKDM |
| 4RDQ Chain:A ((1-366)) | ----TVTYTNRVADARLGTFSQLLLQWKGSIYKLLYSEFLIFISLYFAISLVYRLILSESQRLMFEKLALYCNSYAELIPVSFVLGFYVSLVVSRWWAQYESIPWPDRIMNLVSCNVDGEDEYGRLLRRTLMRYSNLCSVLILRSVSTAVYKRFPSMEHVVRA-GLMTPEEHKKFESLNSPHNKFWIPCVWFSNLAVKARNEGRIRDSVLLQGILNELNTLRSQCGRLYGYDWISIPLVYTQVVTVAVYSFFLACLIGRQFLDPEKAYPGHELDLFVPVFTFLQFFFYAGWLKVAEQLINPFGEDDDDFETNWLIDRNLQVSLMAVDEMHQDLPILEKDLYWNEPDPQPP--YTAATAEYKRPSFLGSTFDIS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RDQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214588 for 1934 contacts (-111.0/contact) +
2D Compatibility (PS) -31356 + (NN) -6821 + (LL) 1104
1D Compatibility (HY) -18400 + (ID) 3100
Total energy: -273161.0 ( -141.24 by residue)
QMean score : 0.001
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