Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLVSFFSFLSKPLIMLLS---NSSWRLS-QPSFLLVGIPGLEESQHWIALPLGILYLLALVGNVTILFIIWMDPSLHQSMYLFLSMLAAIDLVLASSTAPKALAVLLVHAHEIGYIVCLIQMFFIHAFSSMESGVLVAMALDCYVAICHPLHHSTILHPGVIGCIGMVVLVRGLLLLIPFPILLGK-LIFCQATIIGHAYCEHMAVVKLA-CSETTVNRAYGLTMAL-----LVIG-LDVLAIGVSYAH----ILQAVLKVPGSEARLKAFS--TCGSHIC-VILVFYVPGIFSFLTHRFGHHVPHH-V--HVLL-----ATWYLLMPPALNPLVYGVKTQQIRQRVLRVFTQKD--------- |
| 4PE6 Chain:A ((18-339)) | -----------KPFIALSNGFIGNGWRQTMIAKFEEAAKQAQADG---------------LIGKYKVVNAPGNNSATEQVAQIKSLLLQKPDALLINPASPTALQPVIQQACDAGVKVVVFD----SAIDAPCAYILQNSFVDWATYAAKPVLES-------IGGKGNVIVVRGVVGSQPEA----EMYETTKKILAEYPQVKTVATVT-GMCDGATAQKAVLGVLPSVSTVDAVIGCGDGYGVAQAFATAGKPIPAVTFETNGRALSYWKDNKIDNGSVAVMSDPAQSVAALWAALDLLEGRDLPKQMTFPIVLIEEKDRDTWASVLKPD-EYAAWPWTRELFRQQVEAIKTGGEPVQPPIPST |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PE6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -258207 for 2324 contacts (-111.1/contact) +
2D Compatibility (PS) -29220 + (NN) 3255 + (LL) 4560
1D Compatibility (HY) 19600 + (ID) 900
Total energy: -260912.0 ( -112.27 by residue)
QMean score : 0.109
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