Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MLLTDRNTSGTTFTLLGFSDYPELQVPLFLVFLAIYN---------VTVLGNIGLIVIIKINPKLHTPMYFFL-SQLSFVDFCYSSIIAPKMLVNLVVKDRTISFLGCVVQFFFFCTFVV---TESFLLAVMAYDRFVAICNPLLYTVNMSQKLCVLLVVGSYAWGVSCSLELTCSALKLCFHGFNTINHFFCEFSSLLSLSCSD---TYINQWLL-----FFLATFNEIST---LLIVLTSYAFIVVTILKMRSVSGRRKAFSTCAS-HLTAITIFHGTILFLYCVPNSKNSRHTVKVASVFYTV--VIPMLNPLIYSLRNKDVKDTVTEILDTKVFSY--------- |
| 3ZPJ Chain:A ((1-356)) | MTTLEEINLLVERGYYEEALAKVYEIEDPIEQVQVLTKIVVTIYQHDGPMEWIPSIMEDAMYIAKKLRDPANKAVAYSIIASTLAIMEYEEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAGYPDNALEIFNIAFDTIIGAETSYTHKVDGILRIGDLLEKAGDTLPSNEAMDFYKMAFDIFDKLHVNQRAAIVEKKIELAKTVYDVGLPQIRAALLKGKNHYALAIIKKKYSGVMRLIGELEVALWMKRVNNMEYLDVVDKAFECCESPRFTDVNVQHIARLLTELGNLRRALKFAKEIQNIHKRSEALKAIALELVRRKKFEEVKKIIESIPDPKIREEALNEIGTIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -280957 for 2412 contacts (-116.5/contact) +
2D Compatibility (PS) -31043 + (NN) -4413 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 2250
Total energy: -319863.0 ( -132.61 by residue)
QMean score : 0.210
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