Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSAIEAIYIILIAGELTIGIWGNGFIVLVNCIDW--LKRRDISLIDIILI--SLAISRICLLCVISLDGFFMLLFPGTYGNSVLVSIVN-------VVWT-------------FAN--N-SSLWFTSCLSIFYLLKIA------NISHPFFFWL------KLKINKVMLAILLGSFLI-SLIISVPKNDDMWYHLFKVS--------HEENITWKFKVSKIP-GTFKQL-----------TLNLGVMVP-------FILCLISFFLLLFSLVRHTKQIRLHATG-F-RDPSTE--AHMRAIKAVIIFLLLLIVYYP-----VFLVMTSSALIPQGKLVLMIGDIVTVIFPS---------SHSFILIMGNS-KLRE-------------A-FLKMLRFVKCFLR-RRKPFVP------------------------------------------------ |
| 4L8N Chain:A ((6-457)) | NTSICRLGFTYDISQSKN---WGNNKPVIKSIIPYSSAEQAGIKKYDVIEEINGVPVTEV------SVDEIPQLLNPAGR-NDVLLTISNLSSPSKQVLVKKDCKKSNAITEDQLASAYAMYSLETTNEQEFVCPFKTTVTSDGVDFGNFKTFAFSTIDENNRKLETVINECIENELTKKGLTVDIAKPDLLIQTFYFFDKNPNYLGANEKEPTYRYNFSHSKMEKFPFLNYAAAEAEAEYLLQFGIRIIDQKDIPGRVLWECEANELLEDSYRLDEYARVHVPLMCMQYPYTKYGRNVPFKVSKKTYNYTGISYDIDKLDQVVDVDRNSPAYAAG---IRPRDIIEKIGRHKMDHSAEEFSSAYKRFITNTMQYRDPKTMFTDANGFKYCMFWDVFKYPQIADASQSSDYLPAFSYLYYFAPYINPSGNNACTFNIKRGKTKLEVIIRPTIRSEVTVEIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L8N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -253905 for 1807 contacts (-140.5/contact) +
2D Compatibility (PS) -31281 + (NN) 3094 + (LL) 1356
1D Compatibility (HY) -11600 + (ID) 3050
Total energy: -295386.0 ( -163.47 by residue)
QMean score : 0.062
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