Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGISNFKTPSKLSEKKKSVLCSTPTINIPASPFMQKLGFGTGVNVYLMKRSPRGLSHSPWAVKKINPICNDHYRSVYQKRLMDEAKILKSLHHPNIVGYRAFTEA--NDGSLCLAMEYGGEKSLNDLIEERYKASQDPFPAAIILKVALNMARGLKYLHQEKKLLHGDIKSSNVVIKGDFETIKICDVGVSLPLDENMTVTDPEACYIGTEPWKPKEAVEENGVITDKADIFAFGLTLWEMMTLSIPHINLSNDDDDEDKTFDESDFDDEAYYAALGTRPPINMEELDESYQKVIELFSVCTNEDPKDRPSAAHIVEALETDV |
4G31 Chain:A ((10-279)) | ----------------------------------IQCLGRG--GVVFEAKNKVDD---CNYAIKRIRLP----NRELAREKVMREVKALAKLEHPGIVRYFNAWLEKN-KVYLYIQMQLCRKENLKDWMNGRCT--IEERERSVCLHIFLQIAEAVEFLHS-KGLMHRDLKPSNIFFTMD-DVVKVGDFGLV-----------------GTKLYMSPEQIHG-NSYSHKVDIFSLGLILFELLY---PFST-------------QMERVRTLTDVRNLKFPPLF----TQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFED |
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General information:
TITO was launched using:
| RESULT:
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Template: 4G31.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94781 for 1743 contacts (-54.4/contact) +
2D Compatibility (PS) -25244 + (NN) -17098 + (LL) 3616
1D Compatibility (HY) -17200 + (ID) 3100
Total energy: -153807.0 ( -88.24 by residue)
QMean score : 0.447
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