Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTCGDVDASLLPCVAYLTGKAAAPSGDCCAGVRHLRTLPVGTAERRFACDCVKKAAARFKGLNGDAIRDLPAKCAAPLPFPLSLDFDCNTIP
M042 Chain:A ((1-93))
AVTCGDVDASLLPCVAYLTGKAAAPSGDCCAGVRHLRTLPVGTAERRFACDCVKKAAARFKGLNGDAIRDLPAKCAAPLPFPLSLDFDCNTIP
General information:
TITO was launched using:
RESULT:
Template:
M042.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65181 for 726 contacts (-89.8/contact) +
2D Compatibility (PS) -9643 + (NN) -3394 + (LL) 0
1D Compatibility (HY) -12400 + (ID) 4650
Total energy: -95268.0 ( -131.22 by residue)
QMean score : 0.551
(partial model without unconserved sides chains):
PDB file :
Tito_M042.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M042-query.scw
PDB file :
Tito_Scwrl_M042.pdb
: