Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPPGGCVPQLNRLLACRAYLVPGAADPSADCCSALSSISRDCACSTMGIINSIPSRCNIGRVNCSA
M042 Chain:A ((1-172))
QPPGGCVPQLNRLLACRAYLVPGAADPSADCCSALSSISRDCACSTMGIINSIPSRCNIGRVNCSA
General information:
TITO was launched using:
RESULT:
Template:
M042.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52664 for 439 contacts (-120.0/contact) +
2D Compatibility (PS) -6983 + (NN) -4243 + (LL) 0
1D Compatibility (HY) -9200 + (ID) 3300
Total energy: -76390.0 ( -174.01 by residue)
QMean score : 0.609
(partial model without unconserved sides chains):
PDB file :
Tito_M042.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M042-query.scw
PDB file :
Tito_Scwrl_M042.pdb
: