Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGRNPKCLCAVMLSNTARSAGVKPAVAMTIPKRCAIANRPIGYKCGPYTLP
M042 Chain:A ((3-144))
AGECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGRNPKCLCAVMLSNTARSAGVKPAVAMTIPKRCAIANRPIGYKCGPYTLP
General information:
TITO was launched using:
RESULT:
Template:
M042.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5537 for 670 contacts (-8.3/contact) +
2D Compatibility (PS) -8821 + (NN) -2186 + (LL) 0
1D Compatibility (HY) 1600 + (ID) 300
Total energy: -15244.0 ( -22.75 by residue)
QMean score : 0.006
(partial model without unconserved sides chains):
PDB file :
Tito_M042.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M042-query.scw
PDB file :
Tito_Scwrl_M042.pdb
: