Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LTCDDVNNNLISCLSYVAGGGKVPTSCCSGVKNLLSLAKTRNDRQTACSCLKSLAVEANNDQLKRAQTVPKSCSLTIPFPISRDVDCSKVK
M042 Chain:A ((1-117))
LTCDDVNNNLISCLSYVAGGGKVPTSCCSGVKNLLSLAKTRNDRQTACSCLKSLAVEANNDQLKRAQTVPKSCSLTIPFPISRDVDCSKVK
General information:
TITO was launched using:
RESULT:
Template:
M042.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51094 for 662 contacts (-77.2/contact) +
2D Compatibility (PS) -9252 + (NN) -1986 + (LL) 0
1D Compatibility (HY) -12400 + (ID) 4550
Total energy: -79282.0 ( -119.76 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_M042.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M042-query.scw
PDB file :
Tito_Scwrl_M042.pdb
: