Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCGQVASGLASCIPYLKTGGTPPPKCCSGVKAIKSLAITPADRKTICGCLKSGYSSSYNPSLAASLPGKCGVSVPYKISPDTDCSKVQ
M042 Chain:A ((1-93))
VTCGQVASGLASCIPYLKTGGTPPPKCCSGVKAIKSLAITPADRKTICGCLKSGYSSSYNPSLAASLPGKCGVSVPYKISPDTDCSKVQ
General information:
TITO was launched using:
RESULT:
Template:
M042.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51195 for 628 contacts (-81.5/contact) +
2D Compatibility (PS) -9007 + (NN) -3554 + (LL) 0
1D Compatibility (HY) -11600 + (ID) 4450
Total energy: -79806.0 ( -127.08 by residue)
QMean score : 0.602
(partial model without unconserved sides chains):
PDB file :
Tito_M042.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M042-query.scw
PDB file :
Tito_Scwrl_M042.pdb
: