Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASNCGVPVPQC
M042 Chain:A ((2-88))
VTCSPVQLSPCLGPINSGAPSPTTCCQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASNCGVPVPQC
General information:
TITO was launched using:
RESULT:
Template:
M042.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 26780 for 445 contacts (60.2/contact) +
2D Compatibility (PS) -6862 + (NN) -5469 + (LL) 0
1D Compatibility (HY) 4000 + (ID) 100
Total energy: 18349.0 ( 41.23 by residue)
QMean score : 0.037
(partial model without unconserved sides chains):
PDB file :
Tito_M042.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M042-query.scw
PDB file :
Tito_Scwrl_M042.pdb
: