Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DQQVSACQNDIDALWRSCKQFVQKEGPKMPPSEDCCKTIKALDAHASCICDYVGSPDARNKLDLDKVFFVTKQCGVTVPKGCGSKQD
M042 Chain:A ((5-132))
DQQVSACQNDIDALWRSCKQFVQKEGPKMPPSEDCCKTIKALDAHASCICDYVGSPDARNKLDLDKVFFVTKQCGVTVPKGCGSKQD
General information:
TITO was launched using:
RESULT:
Template:
M042.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -213 for 580 contacts (-0.4/contact) +
2D Compatibility (PS) -8347 + (NN) -1492 + (LL) 0
1D Compatibility (HY) 2400 + (ID) 100
Total energy: -7752.0 ( -13.37 by residue)
QMean score : 0.168
(partial model without unconserved sides chains):
PDB file :
Tito_M042.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M042-query.scw
PDB file :
Tito_Scwrl_M042.pdb
: