Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SACSSTFFSALVQLIPCRAAVAPFSPIPPNEACCNAIKALGQPCLCVLVNGPPISGVDRNMALQLPEKCTANFEPCDVMK
M042 Chain:A ((1-119))
SACSSTFFSALVQLIPCRAAVAPFSPIPPNEACCNAIKALGQPCLCVLVNGPPISGVDRNMALQLPEKCTANFEPCDVMK
General information:
TITO was launched using:
RESULT:
Template:
M042.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56852 for 547 contacts (-103.9/contact) +
2D Compatibility (PS) -8498 + (NN) -8871 + (LL) 0
1D Compatibility (HY) -12400 + (ID) 4000
Total energy: -90621.0 ( -165.67 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_M042.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M042-query.scw
PDB file :
Tito_Scwrl_M042.pdb
: