Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VVQGQGACNAATLQPCLAASKGTAAPTTQCCAAVKNVGGAAGGPQCLCSLTTSALARANGVNPDAAMAIPQKCGLAVPKGFTCNNKPVPGS
M042 Chain:A ((5-110))
VVQGQGACNAATLQPCLAASKGTAAPTTQCCAAVKNVGGAAGGPQCLCSLTTSALARANGVNPDAAMAIPQKCGLAVPKGFTCNNKPVPGS
General information:
TITO was launched using:
RESULT:
Template:
M042.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19020 for 594 contacts (-32.0/contact) +
2D Compatibility (PS) -8686 + (NN) -937 + (LL) 0
1D Compatibility (HY) 4400 + (ID) 350
Total energy: -24593.0 ( -41.40 by residue)
QMean score : 0.274
(partial model without unconserved sides chains):
PDB file :
Tito_M042.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M042-query.scw
PDB file :
Tito_Scwrl_M042.pdb
: