Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVDCTSQLAPVAPCLDYVQGNGKTPSSDCCKGLSSLVTTSPVCLCQLSEGKLNLSALGVTVDMKRALSLPTVCKIKGADRSRCAGKLSIP
M042 Chain:A ((1-155))
AVDCTSQLAPVAPCLDYVQGNGKTPSSDCCKGLSSLVTTSPVCLCQLSEGKLNLSALGVTVDMKRALSLPTVCKIKGADRSRCAGKLSIP
General information:
TITO was launched using:
RESULT:
Template:
M042.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43620 for 701 contacts (-62.2/contact) +
2D Compatibility (PS) -9214 + (NN) -2029 + (LL) 0
1D Compatibility (HY) -12800 + (ID) 4500
Total energy: -72163.0 ( -102.94 by residue)
QMean score : 0.292
(partial model without unconserved sides chains):
PDB file :
Tito_M042.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M042-query.scw
PDB file :
Tito_Scwrl_M042.pdb
: