Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DPDQQPPCNTFMSVLSCQSATMSESTMPSPACCAALRKFHDADCLCQVLLSARSAAAIANVPFNLKAALEIPMKCALRTVSAPPGYSCGGMVVPRSPPPTST
M042 Chain:A ((4-125))
DPDQQPPCNTFMSVLSCQSATMSESTMPSPACCAALRKFHDADCLCQVLLSARSAAAIANVPFNLKAALEIPMKCALRTVSAPPGYSCGGMVVPRSPPPTST
General information:
TITO was launched using:
RESULT:
Template:
M042.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21265 for 808 contacts (-26.3/contact) +
2D Compatibility (PS) -10238 + (NN) -6238 + (LL) 0
1D Compatibility (HY) 4400 + (ID) 350
Total energy: -33691.0 ( -41.70 by residue)
QMean score : 0.196
(partial model without unconserved sides chains):
PDB file :
Tito_M042.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M042-query.scw
PDB file :
Tito_Scwrl_M042.pdb
: