Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QGCRGDFRNLAAQCMPYVQKPGPKTPPSKGCCNAVRTVDVPCACQHLPPGVGGTVSLEKVAFVLRVCGKPLKPGTKCGSYTVPPAV
M042 Chain:A ((2-137))
QGCRGDFRNLAAQCMPYVQKPGPKTPPSKGCCNAVRTVDVPCACQHLPPGVGGTVSLEKVAFVLRVCGKPLKPGTKCGS-------
General information:
TITO was launched using:
RESULT:
Template:
M042.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9086 for 546 contacts (16.6/contact) +
2D Compatibility (PS) -8089 + (NN) -4620 + (LL) 172
1D Compatibility (HY) 5600 + (ID) 250
Total energy: 1899.0 ( 3.48 by residue)
QMean score : -0.040
(partial model without unconserved sides chains):
PDB file :
Tito_M042.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-M042-query.scw
PDB file :
Tito_Scwrl_M042.pdb
: