Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIDNHFMSIALSLAEKTLGNVAPNPAVGCIIVKDGVVVGEGHTGIGGRPHAEVAALQSAKGSTHGATMYVTLEPCCHYGVTEPCIIEIIRSGIKKVVVAAIDPDKRVSGGGIKALEEAGITVEQGIMQEEAEKLNIGFFTTRKLHRPFIACKIATTLDGKIATFKGDSKWITSGSTRNWVHELRAKYDAIMIGSNTLINDDPLLTCRLPGLESRSPIRLIIDSQEKLKEKHNVVKTADKVTTWVIINKKIEKK------IKNINYLIVNSNDKPIPASHTGMTSNQGEYSTDKVCLKDMALKLVSEIGITRLLVEGGRVLTTELLKHDLIDRLIICRSGKILGND-AIPFIGNLEIQSINNCYQFKKAEIIDFDEDIVEVWDKLQ |
2B3Z Chain:A ((13-371)) | -MEEYYMKLALDLAKQGEGQTESNPLVGAVVVKDGQIVGMGAHLKYGEAHAEVHAIHMAGAHAEGADIYVTLEPCSHYGKTPPCAELIINSGIKRVFVAMRDPNPLVAGRGISMMKEAGIEVREGILADQAERLNEKFLHFMRTGLPYVTLKAAASLDGKIATSTGDSKWITSEAARQDAQQYRKTHQSILVGVGTVKADNPSLTCRLPN-VTKQPVRVILDTVLSIPEDAKVICDQI-APTWIFTTARADEEKKKRLSAFGVNIFTLE---------------------TERIQIPDVLKILA-EEGIMSVYVEGGSAVHGSFVKEGCFQEIIFYFAPKLIGGTHAPSLISGEGFQSMKDVPLLQFTDITQIGRDIKLTAKPT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B3Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -199432 for 2915 contacts (-68.4/contact) +
2D Compatibility (PS) -38768 + (NN) -16129 + (LL) 652
1D Compatibility (HY) -22800 + (ID) 6350
Total energy: -282827.0 ( -97.02 by residue)
QMean score : 0.535
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