Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MHKILILLLIILPIKLLAVEIEIIADVNGEPISNLDIEKRINLTHSLFGTQSIDKNELKLQILKQLIDEIIIINEAQRLNIKLSDEELSNAVVLFLTQSFKLKDNEVDQYAKEHNIGLNILKRQIECQLL-WDKIIEVRIVPFINISDKEVNNAKGQIEKPDYLITFQEFIIPNQKDADVYGIAEDLVEKLRNNNNDFIPEAPIKMRKV-TVNLNQLKGNLKSILEGLKTGDIAG-PVSSSEDYSIVKVIDKVQLDHAMLESTLKLKQIVVKDSESLLDNLKEQKVNCLNFDELADNFNLPNAKEFEIKMRDLNPDLQALFSKTSVNEIIESRENSTARLMMLCDIKNNVVDAEATKQQIYQQKIMTQSNLLLDNLRKNAAVSYQYS |
| 3RFW Chain:A ((22-273)) | ---------------------ATVATVNGKSISDTEVSEFFAPMLRGQDFKT-LPDNQKKALIQQYIMQDLILQDAKKQN---LEKDPLYTKELDRAKDAILVNVYQEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKG-----------------KELDAKFSELAKEKSID--PGSKNQGGELGWFDQSTMVKPFTDAAFALKNGTITTTPVKTNFGYHVILKENSQ-------AKGQIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNSAKVEYK------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3RFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -19957 for 1524 contacts (-13.1/contact) +
2D Compatibility (PS) -26839 + (NN) -8028 + (LL) 13420
1D Compatibility (HY) 3600 + (ID) 1800
Total energy: -39604.0 ( -25.99 by residue)
QMean score : 0.276
|
|
|