Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLNFNASFSNLYTRNGLIKLDEAFLDYIKSCDEDLFCSLIEAREETTPSSASFQYWTSESRKKEPVSSKNTASSSVSFQCATLESRKHPMSASQMTDSQLIIDLAYLLDGFIAKLFNVEKEIEELKKKHNDFAVIYKCKRLFVQRYALKKYADTENIDIDYVTSELNCFLTLPTTEKIFAEQVMHWFEDRENHKDEIELAAQYAAWRVKNKRSILFNIHRKIDHENLISFSKKEVDKVEVLYSNKIKRRYGFDLT-SEKVSLDKALDNAHYCIFCHKQNKDSCSKGLLETSLSFQHMTLKSKKKEEWIPVSSTGMTGKCTQMSEGCIKSLLNNYNTFKRSPLKVELHGCPLEQKISEMNLVKSEGYNIASLAIAMIDNPLCAATGYKICNDCMNSCIYQKQEP-VNVPMVETRILDDVLSLPYGFEIYSLLSRWNPLNFQQPLPKENTGK--NVLVVGLGPAGFNLAHHLLNDGHNVIAI---DGLKIEPLNDDLQPIKDFKHEKLSERIADGFGGVAEYGITSRWDKNYLKIIRLLLERRENFAIYGGIRFCGTVTVDDAFNLGFNHIALALGSGKPRM--IKIKNILARGVRMASDFLMSLQLTGALKLDSLANLQVRMPIVIIGAGLTAIDTATEALAYYPIQAEKFLLRYEVLVDKYGKDYVEKDWTEEEREIADEFISHAQLICKEKELAKKENREAKILELMQSLGGVKVVYRKELKDSPSYRLNSEEVQNALSEGIYFIENSEPVEIMTDKYSHIESIKLIDTKSHEIKYIKARSILIAAGTEPNTVIATEDKKHFKLSNGYFTHLNSLGEEIDPILSPKMQNKDRILVYKQGGRT----ISFFGDLHPSYSGSVVKAMASAKNGYPIISQLLSGANTATVIPISSPITSVLNTGISASHTQLYECYNIRVTFITKDVISVPRHTAIQTLWLKSNLHQKGYHSSSSFLSPQCVTLGFSKIGYKQTQYATFSAKLTKNWTPVLRTGMTLSHRTNEEFFNRIKEQFTAKVVKVQYLTDKVVEVVIKAPLAAKNFQPGQFFRLQNFETNSRKINNTTFAMEGIAVTGTEVNKKKGLISTIVLETGGSTNLCRYLREGEQIILMGPTGRPTEVY |
| 1HYU Chain:A ((1-521)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MLDTNMKTQLRAYLEK-LTKPVELIATLDDSAKSAEIKELLAEIAELSDKVTFKEDNT---LPVRKPSFLITNPGSQQGPRFA--GSPLG--HEFTSLVLALLWTGGHPSKEAQSLLEQIRDIDGDFEFETYYSLSCHNCPDVVQALN---LMAVLNPRIKHTAIDGGTFQNEITERNVMGVPAVFVNGKEFGQGRMTLTEIVAKVDTGAEKRAAEALNKRDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLD-TVDIENYISVPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGL-----------HQIETASGAVLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCD--------------GPLFKGKRVAVIGGGNSGVEAAIDLAGI---------------------------------------VEHVTLLEFAPEMKADQVLQDKVRS---------------------------------LKNVDIILNAQTTEVKGDG-SKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEGALE---------------------------RNRMGEIIIDAKCETSVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYLIRTKIA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1HYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -211328 for 4325 contacts (-48.9/contact) +
2D Compatibility (PS) -53629 + (NN) -3653 + (LL) 43556
1D Compatibility (HY) -4000 + (ID) 3300
Total energy: -232354.0 ( -53.72 by residue)
QMean score : 0.340
|
|
|