Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRLSQYYLPTLKEKPAHARIISHQYSLRAGLIKQ--IASGIYTWLPLGLRVLKNIEGIIRDEMNKSGAIEALMPCVQPASLWRE-SGRYDDYGKTMLRIRDR----HEEDMLFGPTHEEVATDLIRDIVKSYKNLPLCLYQIQWKFRDEVRPRYGVMRGREFLMKDAYSFNVNYESALNSYNLMYKTYIKIFK-RMGLIPIGVRADTGLIGGNLSHEFHILASTGESTLYYDNKFFELLESEDVKSLKSIYAVADDIHDPKTCPVPQEQLNVSKGIEIGHIFYFGDKYSKPMNAKVTAQDGKNVNIHMGSYGIGVSRLVGAIIEAFHDDKGITWPEAVAPFRVGLINLQTKTA-------EYVEIANKIYSTLK--S-DEVLYDDT-EGSIGVKFAKMDLIGLPWQIIVGKKAVSENIIEIKNRATGK--VEEVQIEEAINYFNVK |
| 3IAL Chain:A ((31-399)) | ------------------------IMDAAELVDRRYPVKGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDHIKGFEAECFWVEKGGLQPLEERLALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHETKNTKPLIRVREIHWNEAHCCHATAEDAVSQLSDYWKVIDTIFSDELCFKGQKLRRV--------CWDR-----------F-PG--ADYSEVSDV-----------------VMP-------CGRVLQTAGIHNLGQRFSSTFDILYANKANESVHPYLTCAGIS-TRVLACALSIHGDSGGLVLPPLIAPIHVVIIPIGCGKKNNQESDQQVLGKVNEIADTLKSKLGLRVSIDDDFSKSMGDKLYYYELKGVPLRIEVGQRDLANGQCIVVPRDVGKDQKRVIPITEVMKVSVVK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3IAL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -195474 for 2811 contacts (-69.5/contact) +
2D Compatibility (PS) -36694 + (NN) -5001 + (LL) 4768
1D Compatibility (HY) -21600 + (ID) 4050
Total energy: -258051.0 ( -91.80 by residue)
QMean score : 0.443
|
|
|