Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----------------------------MEKIENPRENIAY--ELVNNGSKLTNENKQKILELAKKIKKEENIASILKKSGNNAKKILTITVSFNDQEEK------------------------------------------------------------------------------- |
4QGL Chain:A ((1-174)) | GAAAMAQIRIHEVNTRIENEVKVSKFLQEEGVLYEKWNISKLPPHLNENYSLTDENKAEILAVF-----SKEIADVSARRGYKAHDVISLSNSTPNLDELLINFQKEHHHTDDEVRFIVSGHGIFAIEGKDGTFFDVELEPGDLISVPENARHYFTLQDDRQVVAIRIFVTTEGWVPIY |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8474 for 287 contacts (29.5/contact) +
2D Compatibility (PS) -7144 + (NN) -2005 + (LL) 460
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -3465.0 ( -12.07 by residue)
QMean score : 0.464
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