Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAHIPVL-LKEMLLQLSPQNGGIYVDATFGAGGYSKAILESA--DCKVYAID-RDKTVIKFYEDLNIKYPSRVKLFIEKFSNIRSILDSNSLEYLVEPSAVSKLSSIISSGIQKKNIWISASSTGVTPSNTVDGVVFDIGVSSMQLDDGDRGFSFLHDGPLDMRMDNSSHTNASTFVNALREEEIANTIYNYGGERHSRRIARAIVNARKKKTIKTTFELANIVRSVVFRGKSKIDPATRTFQAIRIWVNDELGELEKGIKAASEILNKNGKLIVVTFHSLEDRIVKTFFKSLCEPRSIDCKVFSLLNKKMIKASAEEVNANPRSRSAKLRAIQRLS |
| 4PON Chain:A ((7-197)) | MILKKILPYSKELLKMAAGEGDIVIDATMGNGHDTQFLAELVGENGHVYAFDIQESAVANTKERLGEAYQARTTLFHKSHDKIAKSLPPET-------------------------------------HGKVAAAVFNLGNGSSTIKAIEQLLSIMKDEGLIVLVVYHGN-DVLDFCRNLDQQAARVLTYGFINQQNDPPFIVAIEKKAQ------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PON.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66869 for 1322 contacts (-50.6/contact) +
2D Compatibility (PS) -18077 + (NN) -7161 + (LL) 12660
1D Compatibility (HY) -8400 + (ID) 1900
Total energy: -89747.0 ( -67.89 by residue)
QMean score : 0.438
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