Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNIDFNIINNMININTKRQITGFFVYIIGFSGSGKLSTAIELSNMIDALIVNSNFSNNTQVCSIYDN-----VFEHNHIPEEVQDRIYNIAQIMLQAIEAYLIHSKNYIFIDELMKNNDHNTKMYNSVVELSKRMNTQILPIVLRCDLLTLQKRIKLKRQRENKKATNISSIIENFRTHDSFIPPNAIEIENSNMSIKEVAEKITSQMHKLSQINSIYTKG
1QHX Chain:A ((1-178))
-------------------MTTRMIILNGGSSAGKSGIVRCLQSVLPEPWLAFGVDSLIEAMPLKMQSAEGGIEFDADGGVSIGPEFRALEGAWAEGVVAMARAGARIIIDDVFLGGAAAQERWRSFVGDLD------VLWVGVRCDGAVAEGRETARGDRVAGMAAKQAYVVHEGVEYD-------VEVDTTHKESIECAWAIAAHVVP-----------
General information:
TITO was launched using:
RESULT:
Template:
1QHX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71201 for 1366 contacts (-52.1/contact) +
2D Compatibility (PS) -18624 + (NN) -4002 + (LL) 2508
1D Compatibility (HY) -4800 + (ID) 1150
Total energy: -97269.0 ( -71.21 by residue)
QMean score : 0.279
(partial model without unconserved sides chains):
PDB file :
Tito_1QHX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QHX-query.scw
PDB file :
Tito_Scwrl_1QHX.pdb
: