Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------------MGLLASLPEGHTIIGLQFENLMLNNRKSIPNILGIDEIISENL----FFQRKTGNSAIYQIDYIIRTKFNTLYICEIKFSKNRIGHSIM--------
3PV6 Chain:B ((1-112))
LWVSQPPEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNGTPEFRGRLAPLASSRFLHDHQAELHI-RDVRGHDASIYVCRVEVLGLGVGTGNGTRLVVEKE
General information:
TITO was launched using:
RESULT:
Template:
3PV6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22323 for 531 contacts (-42.0/contact) +
2D Compatibility (PS) -8673 + (NN) 1697 + (LL) -76
1D Compatibility (HY) -800 + (ID) 450
Total energy: -30625.0 ( -57.67 by residue)
QMean score : 0.269
(partial model without unconserved sides chains):
PDB file :
Tito_3PV6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PV6-query.scw
PDB file :
Tito_Scwrl_3PV6.pdb
: