Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGHSNKAADRNSHESRKSYMVNLFGDQWKKANQIYQQYLDNALLQNITLNQGVEKMLQTLKSHNIYLAIVSNKKNINLREEVTYFKLDSYFKRVVGSCDTAEDKPSAIPLLFALEESRLPIDRENVFFVGDSITDILCAQNANCLPIIYGQPISGYEDLLCFQHFDKLTDFIMKYLKDR
3KZX Chain:A ((100-229))
--------------------------------------------DNFMLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSK-EVFFIGDSISDIQSAIEAGCLPIKYGS------DILSFKNFYDIRNFICQLIN--
General information:
TITO was launched using:
RESULT:
Template:
3KZX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83472 for 912 contacts (-91.5/contact) +
2D Compatibility (PS) -13947 + (NN) -9121 + (LL) 2852
1D Compatibility (HY) -10800 + (ID) 2800
Total energy: -117288.0 ( -128.61 by residue)
QMean score : 0.500
(partial model without unconserved sides chains):
PDB file :
Tito_3KZX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KZX-query.scw
PDB file :
Tito_Scwrl_3KZX.pdb
: