Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKNIKNILSITELLSGWL-LHDFANSMNGIMFGLEELEAGNQNDASTHREALLLLKESSDDLIYKHKV---MKQAYSSSADNRSFSQTKLNIE-NYLLKKK
1X29 Chain:B ((205-283))
----------------GWLPLFDFA--YQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPA
General information:
TITO was launched using:
RESULT:
Template:
1X29.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 9248 for 372 contacts (24.9/contact) +
2D Compatibility (PS) -7438 + (NN) 2574 + (LL) 1280
1D Compatibility (HY) -2400 + (ID) 1450
Total energy: 1814.0 ( 4.88 by residue)
QMean score : 0.024
(partial model without unconserved sides chains):
PDB file :
Tito_1X29.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X29-query.scw
PDB file :
Tito_Scwrl_1X29.pdb
: