Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MENKLREIVLDTETTGLD----IESGHRIIEIGCVELINRIPTGKVFHKYLNPERDIPYHSFKIHGISEEFLEDKPLFSDVVFEFLDFISGDILIIHNAEFDIKFLNMELGKLNARLISSD---RVLDTLPLARKKFVGSPASLSALCKRFDISLENRELHGALTDAGLLAKVYVELTGGLQTFLFDNECKQDHNSAFIQHKVRNLTCREHSPSNEEINEHRKLLGKIDNPLWKERIE
1J54 Chain:A ((7-180))
-----RQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAFDIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRTLHGALLDAQILAEVYLAMTG-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1J54.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -112787 for 1310 contacts (-86.1/contact) +
2D Compatibility (PS) -17949 + (NN) -9165 + (LL) 4016
1D Compatibility (HY) -16000 + (ID) 4300
Total energy: -156185.0 ( -119.23 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_1J54.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1J54-query.scw
PDB file :
Tito_Scwrl_1J54.pdb
: