Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNRSTDTKRKEMIELKGPEICTDRSRENLIVCLHGRGSSGNNFVHLAKVMSKSLPNSCFVAPNAPSKREIGNG----YQWFSLE--DRSEEVLYNGVKNAASIVNHFIDTKLKEFSLKDTQLSLVGFSQGAMLAIHTALTR-PQCCASVVAYSGKF--LSPSRVAPKIKSRPNVCVIHGDADNVVPFSFFDLTVKALKENGVNVEGYPIRTLGHLINKEGIKLGVEFIKKNFKK
1AUO Chain:A ((1-218))
MTEPLILQ--------------PAKPADACVIWLHGLGADRYDFMPVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARSISLEELEVSAKMVTDLIEAQKRT-GIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTFGDELELSASQQRIPALCLHGQYDDVVQNAMGRSAFEHLKSRGVTVTWQEYP-MGHEVLPQEIHDIGAWLAARLG-
General information:
TITO was launched using:
RESULT:
Template:
1AUO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128899 for 1737 contacts (-74.2/contact) +
2D Compatibility (PS) -22436 + (NN) -11830 + (LL) 1388
1D Compatibility (HY) -12400 + (ID) 2300
Total energy: -176477.0 ( -101.60 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_1AUO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AUO-query.scw
PDB file :
Tito_Scwrl_1AUO.pdb
: