Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNEERYSTKRITVKEIDEILYEEHRVLDHGFIRVVDYMGSDSAIVQAARVSYGKGTKQINQDEVLIKYLMRYHHTTPFEMCEIKFHVKLPIFIARQWIRHRTANVNEYSARYSILDHEFYIPEPEQVAKQSDNNKQGSGEAFDLDISKEIIDSLIND-SNLVYSHYNKFIEQGLTREIARTNLTLNYYTQFYWKVDLHNLLHFLKLRADKRAQHEIRVYAEVILDIVKKWVPLVHSAFVEYCLESACISRTGLGIIRKLIRGENVTREESNIGKREWEELMFILDKQPER |
3G4A Chain:D ((17-221)) | -------------------------ILDKGFVELVDVMGNDLSAVRAARVSF------EERDRHLIEYLMKHGHETPFEHIVFTFHVKAPIFVARQWFRHRIASYNELAGRYSKLSYEFYIPSPERL------------EGYKTTIPPERVTEKISEIVDKAYRTYLELIESGVPREVARIVLPLNLYTRFFWTVNARSLMNFLNLRADSHAQWEIQQYALAIARIFKEKCPWTFEAFLKYAYKGDILKEV--------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165064 for 1475 contacts (-111.9/contact) +
2D Compatibility (PS) -20591 + (NN) -656 + (LL) 5228
1D Compatibility (HY) -19200 + (ID) 4750
Total energy: -205033.0 ( -139.01 by residue)
QMean score : 0.388
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