Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLLSQEANSNSVEAQKLQQVDNITPSSEGLLQQMQSLEKRIKSLEVTNRVILGLFIGTLATAMTVGAGFAIAAAPIIAGSIVGGVLATVALVALGATVYRCRAQVEAGFRYAAEKTIKGVKYIGEKIKDSAIHTKDSVKEAVSSIGQVAREETSSVLKTMGHKLSGLGASMSNLDSIPYSIGLQDSMVVSKTEEKTKNFNSIKEMFVKEVFEDKAIDSSVLVKKIFSELKGKVLEKAYSVDGQQGFKKDQLINQLGQQADFVSKLSSKKLQNLLAQGDNNLYEIFSEHHDEIKRIVKEHKTEHNFSESLNRMA-KRHDENRKDSTQSSLPRSNSLSSVRTDSTVNSVAELLNSEGHRKVRSSSKLLRWLPWNKVSKAPEEAANVKYQVLPESDILAREIGKRTFYGIPVPAEGVDKTVTVNPNLFRSNSPNSLYGSPVLTPAVLLQVPKSLSLGSLSSDSGMDSGPSTLEKQSLSPEDLAKARASLKNTGSLGKLVEQQPSASPPAVEDVSEDLEEDFKKDKPATTFSQLKAEKSGAEVSYL |
3QOE Chain:A ((2-296)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SNDVDLIKRLGPSAMDQIMLYLAFSAMRTSGHRHGAFLDAAATAAKCAIYMTYLEQGQNLRMTGHLHHLEPKRVKAIVEEVRQALTEG-KLLKMLGSQEPRYLIQFPYVWMEKYPWRPGRSRIPGTSLTSEEKRQIEQKLPSNLPDAHLITSFEFLELIEFLHKRSQEDLPKEHQM------------------------PLSEALAEHIKRRLLY---------SGTVTRIDSPW--GMPFYALTRDQERTYIMVEDTARFFRMMRDWAEKRPNTMRVLEELDILPEKMQQAKDELDEIIRAWADPVVLQMVFGKK------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 60993 for 1685 contacts (36.2/contact) +
2D Compatibility (PS) -28378 + (NN) -1613 + (LL) 19240
1D Compatibility (HY) -2800 + (ID) 1800
Total energy: 45642.0 ( 27.09 by residue)
QMean score : 0.200
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