Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLIRIGTRGSSLAIAQALEAKQKLLDLFSSLSVEIIKIKTSGDKYANANLAEIGGKGLFIKEIETELIKSNIDMAVHSLKDVPAFFSKDLTIPCILE-----RLSPYDTFIS--NKYKSLKSLPQQAIIATSSIRRKVQLLNFRPDLNIVPLRGNVTTRLQNQSFDGIILAEAGLIRLKKDYLITEVLSPKTMLSAVGQGAICIQCRKNDIKIIDLLEKIN-NNKSFIRVKSERSFMKTVNGSCFTPLAALAKYVSENVLHLYCMLADKKNIY--FTERTSFVEDAEKMGMDAGLELKSKCL---- |
| 4D79 Chain:A ((3-268)) | --VVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGS-WAAEALARTGIGAITLIDMD-DVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQYMSVGYSYVIDAIDSVRPKAALIAYCRRNKI---------------------------------------------PLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKN--------------SKGKLGVDCVFSTEALVYPGFGAATMVTATFGFVAVSHALKKMMAKAARQG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27510 for 1961 contacts (-14.0/contact) +
2D Compatibility (PS) -23856 + (NN) 141 + (LL) 5036
1D Compatibility (HY) -7200 + (ID) 2250
Total energy: -55639.0 ( -28.37 by residue)
QMean score : 0.152
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