Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRLIRMSVLASGS--TGNATFVENEKGSLLVDVGLTGKKMEE------LFS----QIDRNIQDLNGILVTHEHIDHIKGLGVLARK--YQLPIYANEKTWQAIEKKDSRIP--------------------MDQKFIFNPYETKSIA-GFDVESFNVSHDAIDPQFYIFHNN--YKKFTILTDTGYVSDRMKGM----IRGSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLNEHDIDTEKEVLLCDTDKAIPTPIYTI |
| 3AF5 Chain:A ((187-398)) | --RWIRITGLGGFREVGRSALLVQTDESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLREGLLDAIIITHAHLDHCGMLPYLFRYNLFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGH-ILGSAIVHLHIGNGLHNIAITGDFKFIPTRLLEPANAKFPRLETLVMESTYGGA-------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3AF5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -46242 for 1304 contacts (-35.5/contact) +
2D Compatibility (PS) -18269 + (NN) -1452 + (LL) 6044
1D Compatibility (HY) -14000 + (ID) 1800
Total energy: -75719.0 ( -58.07 by residue)
QMean score : 0.412
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