Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIE-----QVKEKEGQRILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSNGLHKDVLQRSNYALSFSKMTFPHQMMRVVLIEQVY-RAFKIMRGEAYHK------------
2O3A Chain:A ((1-167))
LEVYVLRLGHRPDKRISTHVALTARAFGA--KGIYFDTEDKSVFESVRDVVERWGGDFFIKAVSWKKLLREFD--GLKVHLTMYGIPLPQKLEEIK-------RADKVLVVVGP-----PEVYELCDLNISIGTQPHSEVAALAVFLDRVLGKVFDISFDDAKIKVIPSERGKRVVS
General information:
TITO was launched using:
RESULT:
Template:
2O3A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45979 for 1076 contacts (-42.7/contact) +
2D Compatibility (PS) -16010 + (NN) -5303 + (LL) 760
1D Compatibility (HY) -8000 + (ID) 1200
Total energy: -75732.0 ( -70.38 by residue)
QMean score : 0.342
(partial model without unconserved sides chains):
PDB file :
Tito_2O3A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O3A-query.scw
PDB file :
Tito_Scwrl_2O3A.pdb
: