Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSYAVCRMQKVKSAGLKGMQFHNQRERKSRTNDDIDHERTRENYDLKNDKNIDYNERVKEIIESQKTGTRKT-RKDAVLVNELLVTSDRDFFEQLDPGEQKRF---FEESYKLFSERYGKQNIAYATVHNDEQTPHMHLGVVPMRDGKLQGKNVFNRQELLW-LQDKFPEHMKKQGFELKRGERGSDRKHIETAKFKKQTLEKEIDFLEKNLAVKKDEWTAYSDKVKSDLEVPAKRH---MKSVEVPTGEKSMFGLGKEIMKTEKKPTKNVVISERDYKNLVTAARDNDRLKQHVRNLMSTDMARE--YKKLSKEHGQV--KEKYSGLVERFNENVNDYNELLEENKSLKSKISDLKRDVSLIYESTKEFLKERTDGLKAFKNVFKGFVDKVKDKTAQFQEKHDLEPKKNEFELTHNREVKKERSRDQGMSL----- |
4IC4 Chain:A ((26-397)) | -KSVTRRNDIPEAAASPPSLLSFLRKNVGKDLSSI-------AMPVTSNEPISILQLISETFEYAPLLTKATQRPDPITFVSAFAISFLSIYRDKTRTLRKPFNPLLAETFELIREDMGFRLISEKVSHRPP-------------------VFAFFAEHLDWECSYTVTPSQKFWGKSIELNNEG-----ILRLKFKTTG--------------ELFEWTQPTTILKNLIAGERYMEPVNEFEVHSSKGDKSHILFDKAGMFSGR---------SEGFKVSIIPPPSSNRKKETLAGKWTQSLANETTHETIWEVGDLVSNPKKKYGFT-KFTANLNEITEI--EKGNLPPTDSRLRPDIRAYEEGN-------VDKAEEWKLKLEQLQRERRNKGQDVEPKYFEKVSKNEWKYITGPKSYWERRKKHDWSDISQLW |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IC4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 224448 for 2826 contacts (79.4/contact) +
2D Compatibility (PS) -35699 + (NN) 8290 + (LL) 4696
1D Compatibility (HY) -7200 + (ID) 3400
Total energy: 191135.0 ( 67.63 by residue)
QMean score : 0.071
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