Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIVNGPIIMT----REERMKIVHEIKERI--LDKYGDDVKAIGVYGS--------------LGRQTDGPYSDIEMMCVMSTEEAEFSHEWTTGEWKVEVNFDSEEI------------------LLDYASQVESDWPLTHGQFFS--------ILPIYDSGGYLEKVYQTAKSVEAQTFHDAICAL-----------IVEELFEYAG--------KWRNIRVQGPTTFLPSLTVQ-----VAMAGAMLIGLHHR-ICYTTSASVLTEAVKQSDLPS----GYDHLCQFVMS-GQLSDSEKLLESLENF------WNGIQEWTERHGYIVDVSKRIPF------------------ |
| 3ZPJ Chain:A ((1-356)) | MTTLEEINLLVERGYYEEALAKVYEIEDPIEQVQVLTKIVVTIYQHDGPMEWIPSIMEDAMYIAKKLRDPANKAVAYSIIASTLAIMEYEEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAGYPDNALEIFNIAFDTIIGAETSYTHKVDGILRIGDLLEKAGDTLPSNEAMDFYKMAFDIFDKLHVNQRAAIVEKKIELAKTVYDVGLPQIRAALLKGKNHYALAIIKKKYSGVMRLIGELEVALWMKRVNNMEYLDVVDKAFECCESPRFTDVNVQHIARLLTELGNLRRALKFAKEIQNIHKRSEALKAIALELVRRKKFEEVKKIIESIPDPKIREEALNEIGTIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58493 for 1752 contacts (-33.4/contact) +
2D Compatibility (PS) -26400 + (NN) -1780 + (LL) 0
1D Compatibility (HY) -11200 + (ID) 2350
Total energy: -100223.0 ( -57.20 by residue)
QMean score : 0.219
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