Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYTGSLYLSLISLLQNHTFQ--PEEKVCLFSYGSGAVGEIFS------GSIVKGYDKALDKEKHL-NMLESREQLSVEEYETFFNRFDNQEFDFERELTQDPYSKVYLYSIEDHIRTYKIEK
2WYA Chain:B ((333-418))
MYTSSLYGCLASLLSHHSAQELAGSRIGAFSYGSGLAASFFSFRVSQDAAPGSPLDKLVSSTSDLPKRLASRKCVSPEEFTEIMNQ------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2WYA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9905 for 356 contacts (-27.8/contact) +
2D Compatibility (PS) -8225 + (NN) -2299 + (LL) 2640
1D Compatibility (HY) -4000 + (ID) 1500
Total energy: -23289.0 ( -65.42 by residue)
QMean score : 0.341
(partial model without unconserved sides chains):
PDB file :
Tito_2WYA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WYA-query.scw
PDB file :
Tito_Scwrl_2WYA.pdb
: