Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNKTYEISSAEWEVMNIIWMKKYASANNIIEEIQMQKDWSPKTIRTLITRLYKKGFIDRKKDNKIFQYYSLVEESDIKYKTSKNFINKVYKGGFNSLVLNFVEKEDLSQDEIEELRNILNKK
2FA5 Chain:A ((44-149))
----RYGMAIPEWRVITILALYPGSSASEVSDRT----AMDKVAVSRAVARLLERGFIR------RSMLALS--------PAGRQVYETVAPL-VNEMEQRLM--SVFSAEEQQTLERLIDR-
General information:
TITO was launched using:
RESULT:
Template:
2FA5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56053 for 631 contacts (-88.8/contact) +
2D Compatibility (PS) -9949 + (NN) -1756 + (LL) 1480
1D Compatibility (HY) -6000 + (ID) 850
Total energy: -73128.0 ( -115.89 by residue)
QMean score : 0.582
(partial model without unconserved sides chains):
PDB file :
Tito_2FA5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FA5-query.scw
PDB file :
Tito_Scwrl_2FA5.pdb
: