Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELIGDKSTVQQAIHALQLIGFENVKSYRLPQTNIVTSSIHSSEMTGEEHNVLDVRNDDEWRKGHLKQAIHIPHGKLLNEDIPFDKNDLIYVHCQSGVRSSIAVGILEYKGFTNIVNVRGGYQHLPAFLK
3FOJ Chain:A ((16-96))
----------------------------------------------ANPVNIVDVRTDQETAMGIIPGAETIPMNSIPDNLNYFNDNETYYIICKAGGRSAQVVQYLEQNGVN-AVNVEGGMDEFGDE--
General information:
TITO was launched using:
RESULT:
Template:
3FOJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -46086 for 549 contacts (-83.9/contact) +
2D Compatibility (PS) -8929 + (NN) -3629 + (LL) 3816
1D Compatibility (HY) -3600 + (ID) 1300
Total energy: -59728.0 ( -108.79 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_3FOJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FOJ-query.scw
PDB file :
Tito_Scwrl_3FOJ.pdb
: