Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFFKQFYDNHLSQASYLVGCQRTGEAIIIDPVRDLSKYIEVADSEGLTITQATETHIHADFASGIRDVAKRLNANIYVSGEGEDALGYKNMPSKTQFVKHGDIIQVGNVKLEVLHTPGHTPESISFLLTDLGGGSSVPMGLFSGDFIFVGDIGRPDLLEKSVQIKGSTEISAKQMYESVQNIKNLPDYVQIWPGHGAGSPCGKALGAIPISTIGYEKINNWAFNEIDETKFIESLTSNQPAPPHHFAQMKQVNQFGMNLYQSYDVYPSLDNKRVAFDLRSKEAFHGGHTKGTINIPYNKNFINQIGWYLDFEKDIDLIGDKSTVEKAKHTLQLIGFDKVAGYRLPKSGISTQSVHSADMTGKEEHVLDVRNDEEWNNGHLDQAVNIPHGKLLNENIPFNKEDKIYVHCQSGVRSSIAVGILESKGFENVVNIREGYQDFPESLK |
1XM8 Chain:A ((1-173)) | MQIELVPCL-KDNYAYILHDEDTGTVGVVDPSE-AEPIIDSLKRSGRNLTYILNTHHHYDHTGGNLELKDRYGAKVIGSAMD-KDRIP----GIDMALKDGDKWMFAGHEVHVMDTPGHTKGHISLYFPGS-------RAIFTGDTMFSLSCGKL--FE----------GTPKQMLASLQKITSLPDDTSIYCGHEYTL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1XM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -99481 for 1484 contacts (-67.0/contact) +
2D Compatibility (PS) -19056 + (NN) -9006 + (LL) 13084
1D Compatibility (HY) -5200 + (ID) 2300
Total energy: -121959.0 ( -82.18 by residue)
QMean score : 0.438
|
|
|