Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKHYQIVIIGGGTAGVTVASRLLRKNQNLKEKIAIIDPADHHYY-QPLWTLVGAGVSSLKSSRKDMESVIP-EGANWIK-QAVSSFQPENNSVILGDNTVVYYDFLVVAPGLQINWSSIKGLKENIGKNGVCSNYSPDYVNETWNQISNFKQGNAIFTHPNTPIKCGGAPMKIMYLAEDYFRKHKIRSNANVIYATPKDALFD-VGKYNKELERIVEERNITVNYNYNLVEIDGDKKVATFEHIKAYDRKTISYDMLHVTPPMGPL-DVVKESTLSDSEGWVDVNPTTLQHKSYSNVFALGDASNVP--TSKTGAAIRKQAPIVANNLLQVMNNQMLTHHYDGYTSCPIVTGYNRLILAEFDYNKNTKETMPFNQAKERRSMYIFKKDLLPKMYWYGMLKGLI |
| 1XHC Chain:A ((9-301)) | ----SKVVIVGNGPGGFELAKQLS--Q---TYEVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKRGIEIRLAEEAKLIDRGRKVVITE-KGEVPYDTLVLATGARAREPQIKGKE------YLLTLRTIFDADRIKESI----------ENSGEAIIIGGGFIGLEL--AGNLAEAG----YHVKLIHRGAMFLGLDEELSNMIKDMLEETGVKFFLNSELLEANEEG--VL-TN-----SGFIEGKVKICAIGIVPNVDLARRSGIHTGRG-ILIDD-NFR-TSAKDVYAIGDCAEYSGIIAGTAKAAMEQARVLADILKG------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XHC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147196 for 2357 contacts (-62.5/contact) +
2D Compatibility (PS) -30930 + (NN) -15026 + (LL) 7596
1D Compatibility (HY) -13600 + (ID) 2650
Total energy: -201806.0 ( -85.62 by residue)
QMean score : 0.424
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