Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIIYCITKA--DNGGAQTHLIQLANHFCVHHDVYVIVGN-HGPMIEQLD--ARVNVIILEHLVGPIDFKQDILAVKVLAQLFSKIKPDVIHLHSSKA-GTVGRIAKFISKSKDTRVVFTAHGWAFTEGVKPAKKFLYLVIEKLMSCITDSIICVSDFDKQLALKYRFNRLKLTTIHNGIADVPAVKQTLKSQSHNNIGEVVGMLPNKQDLQINAPTKHQFVMIARFAYPKLPQNLIAAIEILKLHNS-NHAHFTFIGDGPTLNDCQQQVVQAGLENDVTFLGNVIN--ASHLLSQYDTFILISK-------HEGLPISIIEAMATGLPVIASHVGGISELVAD-NGICMMNNQPETIAKVLEKYLIDSDY-IKMSNQSRKRYLECFTEEKMIKEVEDVYNGKSTQ |
| 3OKP Chain:A ((5-380)) | RKTLVVTNDFPPRIGGIQSYLRDFIATQD-PESIVVFASTQNAEEAHAYDKTLDYEVIRWPRSV--M--LPTPTTAHAMAEIIREREIDNVWFGAAAPLALMAGTA-KQAG--ASKVIASTHGHEVGWSM--L-P-GSRQSLRKIGTEVDVLTYISQYTLRRFKSAFGSHPTFEHLPSGVDVKRFTPATPE--DKSATR--------KK--LGFTDTTPVIACNSRLVPRKGQDSLIKAMPQVI--AARPDAQLLIVGSGRYESTLRRLATD--VSQNVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTPATGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERLTNILQSEP-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OKP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -249062 for 3069 contacts (-81.2/contact) +
2D Compatibility (PS) -38758 + (NN) -13872 + (LL) 1192
1D Compatibility (HY) -4400 + (ID) 3050
Total energy: -307950.0 ( -100.34 by residue)
QMean score : 0.472
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