Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKLKLMTIVGTRPEIIRLSSTIKACDQYFNQILVH----TGQNYDYTLNQIFFDDLELRQPDHYLEAVGSNLGETMGNIIAKTYDVLLREQPDALLILGDTNSCLAAVSAKRLKIPVFHMEAGNRCFDQNVPEEINRKIVDHVSDVNLPYTEHSRRYLLDEGFNKANIFVTGSPMTEVIEAHRDKINHSDVLNKLGLEPQQYILVSAHREENIDNEKNFKSLMNAINDIAKKYKMPVIYSTHPRSWKKIEESKFEFDPLVKQLKPFGFFDYNALQKDAFVVLSDSGTLSEESSILKFPGVLIRTSTERPEVLDKGTVIV----GGITYNNLIQSVELAREMQNNNEPMIDAIDYKDTNVSTK--VVKIIQSYKDIINRNTWRK |
| 1F0K Chain:A ((7-357)) | --KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQ------NGIAGLTNKWLAKIATKVMQAFPGAFP-----------NAEVVGNPVRTDVLALPLPQQRLA-----GREGPVRVLVVGGSQ---GARILNQTMPQVAAKLGDS--VTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERARAASIPDATERVANEVSRVARAL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48324 for 3025 contacts (-16.0/contact) +
2D Compatibility (PS) -36087 + (NN) -7484 + (LL) 2216
1D Compatibility (HY) -800 + (ID) 2050
Total energy: -92529.0 ( -30.59 by residue)
QMean score : 0.323
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