Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILNIVSSNIVQDPRVLKQIETIKGVTNDYKIVGMNNSQATNRRLENLDCNYRLLGSKVDPKNILSKLIKRIRFATGVIREIKAFKPDVIHANDFDVLLMVYLSNYKKANIVYDAHEIYAKNAFINKVPLISKFVESIEKHIVKHRVNAFVTVSHAAKEYYQSKGYKKEANVITNAPILNDSREFKEIENFKE------IVYQGQIVMDRGYEEFIIASSAFKQNAPS--FIIRGFGPHEEVIKELISYNSENIRLDKPVEVKEL-------------VDKLAESNVGVILTKPVSINFEYTVSNKIFECIHAGLPVILSPV-----------------KEHIYLNEKYKFGIVLKEVTPLEIEKAVRKLRDNHDLFNHLRQNAIKASKILNWQIESERLVELYKF--- |
| 3OY2 Chain:A ((1-392)) | MKLIIVGA----HSSVPSGYGRVMRAIVPRIS--KAHEVIVFGIHAFGRSVHANIEEFDAQTAEHVRGLNEQGFYYSGLSEFIDVHKPDIVMIYNDPIVIGNYLLAMGKCS--------HRTKIVLYVDLVSKNIRENLWWIFSHPKVVGVMAMSKCWISDICNYGCKVPINIVSHFVDTKTIYDARKLVGLSEYNDDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSSGEGF----GLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAFTFFKDEKNRKEYGKRVQDFVKTKPTWDDISSDIIDFFNSLLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OY2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34549 for 2839 contacts (-12.2/contact) +
2D Compatibility (PS) -36810 + (NN) -5638 + (LL) 2032
1D Compatibility (HY) -5600 + (ID) 1950
Total energy: -82515.0 ( -29.06 by residue)
QMean score : 0.263
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