Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKKILILCQYFYPEYVSSATLPTQLAEDLIANHINVDVMCGWPYEYSNHKQVSKTEMHRGIRIRRLKYSRFNNKSKVGRIINFFSLFSKFVINIPKMLKYDQILVYSNPPILPLIPDVLHRLLKKKYSFVVYDIAPDNAIKTGATRPGSMIDKLMRYINRHVYKNAENVIVLGTEMKNYLLNHQISKNADNIHVIPNWYDMRQLQDNRIYNDTFKAYREQYDKILLYSGNMGQLQD-METLISFL-KLNKDQPQTLTILCGHGKKFADVKTAIEDHRIENVKMFEFLTGTDYADVLKIADVCIASLIKEGVGLGVPSKNYGYLAAKKPLV---LIMDKQSDIVQHVEQYDAGIQIDNGDAHAIYNFINT--HSSKELHEMGERAHQLFKD---KYTREINTMKYYNLLK-------- |
| 2GEK Chain:A ((21-393)) | ---MRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVSVLAPASPHVKLPDYVVSGGKAVFGPATHRKVKKWIAEGDFDVLHIHEPNAPSLSMLALQAAEGPIVATFHTST------------------------------------TKSLTLSVFQGILRPYHEKIIGRIAVSDLARRWQMEAL----GSDAVEIPNGVDVASFADAPLLDGY-----PREGRTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDEDELREQ--AGDLAGHLRFLGQVDDATKASAMRSADVYCAP--------HLGGESFGIVLVEAMAAGTAVVASDLDAFRRVLADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHRYDWSVVSAQIMRVYETVSGAGIKVQVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -157616 for 2840 contacts (-55.5/contact) +
2D Compatibility (PS) -37153 + (NN) -16316 + (LL) 4592
1D Compatibility (HY) -4000 + (ID) 2250
Total energy: -212743.0 ( -74.91 by residue)
QMean score : 0.418
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