Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWSFKSMFNTPEDPEKDAYEFYGKVQPGITTPTQKTCNFVALDLK--SKDRDAIKAMFKKWTVMADRMMDGDTVGKTSNNPLMPPVDTGESIGLGASKLTITFGISKSLMKKIGLSSKIPDAFKDLPHFPNDQLIDDYSDGDIMIQACSNDSQVSFHAVHNLVRPFRDIVKVRWAQSGFISAKGKETPRNLMAFKDGTINPRKSNQLKD-YVFIDDGWAKHGTYCVVRRIQIHIETWDRTALEEQEATFGRKRHSGAPLTGGKEFDEIDLKAKDSHGEYIIDKDAHTRLAKEANTSILRRAFNYVDGTDDRTGNFETGLLFIAFQKATKQFIDIQNNL------GSNDKLNEYITHRGSASFLVLPGVSKGGYLGETLFD |
| 3QNS Chain:A ((8-318)) | VARLAPQ--------------------AVLTPPSAASLFLVLVAGDSDDDRATVCDVISGIDGPLKAVGFRELAGS----------------------LSCVVGVGAQFWDRV-SASSKPAHLHPFVPLSGPVHSAPSTPGDLLFHIKAARKDLCFELGRQIVSALGSAATVVDEVHGFRYFDS----RDLLGFVDGTENPTDDDAADSALIGDEDPDFRGGSYVIVQKYLHDMSAWNTLSTEEQERVIGRTKLENVELDDDA-------QPSNSHVTLNTIVDDDGV-----EHDILRDNMAF-----GSLGEAEYGTYFIGYAKDPAVTELMLRRMFLGEPPGNYDRVLDF-STAATGTLFFVPSRDVLESLGD---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QNS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99182 for 2494 contacts (-39.8/contact) +
2D Compatibility (PS) -31663 + (NN) -7347 + (LL) 2204
1D Compatibility (HY) -11600 + (ID) 2750
Total energy: -150338.0 ( -60.28 by residue)
QMean score : 0.324
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